This reverts commit 6cba6091.

(cherry picked from commit 710fb9e2)

(cherry picked from commit a5194b4f)

(cherry picked from commit b3daefcf)

4.3: cherry picked fixes to mode_compute = 5 and gsa

-) estimation options for data set must be given also when ppost=1 (fix in testsuite);

Manual cherry pick from commit:ab5b922e

Manual cherry pick from commit:afc24549

GSA fixes for rmse analysis (cherry picked)

Proper use of dataset_ structure and remove the dangerous dat_fil_ utility;
Added r2 in output.
(cherry picked from commit f5a6835c)

(cherry picked from commit e3762580)

(cherry picked from commit fe7a1248)

(cherry picked from commit a7e29af8)

This is necessary to enforce the documented behavior which says that, if a
variable is not given a value in the endval block, a zero value is assumed.
(cherry picked from commit cf146ec4)

4.3; bug fixes for GSA tools

(manual cherry picked from ad34f3db)

(cherry picked from commit 3aa94198)

(cherry picked from commit e786fa86)

(cherry picked from commit d5402a79)

(cherry picked from commit e2b01dd1)

Closes #353
(cherry picked from commit d640546e)

Fix issue for threshold reduced form mapping with posterior samples;

2) Improve the notation of info saved of  threshold reduced form mapping which was obscure.

Manual cherry-pick from commit aa4e81f84bc7bf80cba888943263e6458a236065

Johannes Pfeifer authored 12 years ago and Sébastien Villemot committed 12 years ago

Closes #317
(cherry picked from commit c071df7f)

Fixed bug introduced in commit c9402d9e ...

(cherry picked from commit 9ca68984)

4.3ç cherry picked parallel fixes

1) properly manage hybrid matlab/octave computations;
2) check for function handles under octave, which cannot be saved on a mat file;
3) bug fix for non standard octave path;
4) synchronization fix under octave;
5) Retrieve missing output files when remote threads are finished;
6) check if input files have been updated, like in metropolis computations with load_mh_file=1;
7) check if output files are missing to trap synchronization failures: this may be inefficient and needs to be improved for unix/windows clusters;
8) fixed cleanup with multiple remote nodes.
(cherry picked from commit c9402d9e)

(cherry picked from commit 844cbac2)

(cherry picked from commit 8de02041)

2) removed return after failure of ping; some machines like hal can be connected but do not allow ping;
(cherry picked from commit 0fb68813)

manual cherry-pick from Commit:09bc0a0a

Manual cherry-pick from commit:fe0054f3

Manual cherry pick from commit:
Commit:84f0d6c7

- use ilu with type=ilutp instead of nofill. Contrary to luinc command i...

- use ilu with type=ilutp instead of nofill. Contrary to luinc command ilu with nofill option doesn't not allow for partial pivoting

4.3: cherry-picked Parallel debug and several fixes of GSA toolbox

Fixed spurious bugs when new MC smoother is invoked when an old one is already present in gsa results subfolders
(cherry picked from commit 9a622298)

Manual cherry-pick from commit:
543b4040

2) better cleanup of remnants of remote parallel runs when Strategy ==1
3) for  windows sessions eliminate the use of start, replaced by psexec -d  instanced, to allow cleanup of .bat file
4) fix bug in Strategy==1 that was not properly cleaned by deleting new files on exit
(cherry picked from commit 6ec501bccbae35de92e6566cbb3341468677016b)