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Bugfix for conditional variance decomposition

Johannes Pfeifer requested to merge JohannesPfeifer:conditional_variance_decomp into master

The flag sigma_e_is_diagonal used only for conditional variance decomposition was erroneously set if the covariance matrix was diagonal but contained a 0 on the main diagonal. This led to subsequent problems in conditional variance decomposition as those tried to perform a Cholesky decomposition of a not strictly positive definite matrix.

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