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Frédéric Karamé
dynare
Commits
025db5c5
Commit
025db5c5
authored
Feb 7, 2011
by
Marco Ratto
Browse files
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bug fixes for file exchange through the network under octave
parent
12555b43
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Changes
2
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2 changed files
matlab/parallel/dynareParallelGetFiles.m
+42
-5
42 additions, 5 deletions
matlab/parallel/dynareParallelGetFiles.m
matlab/parallel/dynareParallelSendFiles.m
+51
-5
51 additions, 5 deletions
matlab/parallel/dynareParallelSendFiles.m
with
93 additions
and
10 deletions
matlab/parallel/dynareParallelGetFiles.m
+
42
−
5
View file @
025db5c5
...
...
@@ -44,7 +44,44 @@ for indPC=1:length(Parallel),
if
~
ispc
,
%isunix || (~matlab_ver_less_than('7.4') && ismac),
for
jfil
=
1
:
size
(
NamFileInput
,
1
),
% if ~isempty(dynareParallelDir(NamFileInput{jfil,2},[PRCDir,filesep,NamFileInput{jfil,1}],Parallel(indPC))),
if
exist
(
'OCTAVE_VERSION'
)
% Patch for peculiar behaviour of ls under Linux.
% It is necessary to manage the jolly char '*'!
FindAst
=
strfind
(
NamFileInput
{
jfil
,
2
},
'comp_status_random_walk_metropolis_hastings_core*'
);
if
isempty
(
FindAst
)
[
NonServeL
NonServeR
]
=
system
([
'scp '
,
Parallel
(
indPC
)
.
UserName
,
'@'
,
Parallel
(
indPC
)
.
ComputerName
,
':'
,
Parallel
(
indPC
)
.
RemoteDirectory
,
'/'
,
PRCDir
,
'/'
,
NamFileInput
{
jfil
,
1
},
NamFileInput
{
jfil
,
2
},
' '
,
NamFileInput
{
jfil
,
1
}]);
else
filenameTemp
=
NamFileInput
{
jfil
,
2
};
[
NotUsed
FlI
]
=
system
([
'ssh '
,
Parallel
(
indPC
)
.
UserName
,
'@'
,
Parallel
(
indPC
)
.
ComputerName
,
' ls '
,
Parallel
(
indPC
)
.
RemoteDirectory
,
'/'
,
PRCDir
,
'/'
,
filenameTemp
,
' 2> OctaveStandardOutputMessage.txt'
]);
if
isempty
(
FlI
)
return
end
AstPos
=
strfind
(
filenameTemp
,
'.mat'
)
-
1
;
FiMat
=
findstr
(
FlI
,
'.mat'
);
NumFileToCopy
=
length
(
FiMat
);
for
i
=
1
:
NumFileToCopy
Ni
=
num2str
(
i
);
filenameTemp
(
1
,
AstPos
)
=
Ni
;
[
NonServeL
NonServeR
]
=
system
([
'scp '
,
Parallel
(
indPC
)
.
UserName
,
'@'
,
Parallel
(
indPC
)
.
ComputerName
,
':'
,
Parallel
(
indPC
)
.
RemoteDirectory
,
'/'
,
PRCDir
,
'/'
,
NamFileInput
{
jfil
,
1
},
filenameTemp
,
' '
,
NamFileInput
{
jfil
,
1
}]);
end
end
else
[
NonServeL
NonServeR
]
=
system
([
'scp '
,
Parallel
(
indPC
)
.
UserName
,
'@'
,
Parallel
(
indPC
)
.
ComputerName
,
':'
,
Parallel
(
indPC
)
.
RemoteDirectory
,
'/'
,
PRCDir
,
'/'
,
NamFileInput
{
jfil
,
1
},
NamFileInput
{
jfil
,
2
},
' '
,
NamFileInput
{
jfil
,
1
}]);
end
% end
end
else
...
...
This diff is collapsed.
Click to expand it.
matlab/parallel/dynareParallelSendFiles.m
+
51
−
5
View file @
025db5c5
...
...
@@ -44,7 +44,7 @@ for indPC=1:length(Parallel),
if
~
ispc
,
%isunix || (~matlab_ver_less_than('7.4') && ismac),
for
jfil
=
1
:
size
(
NamFileInput
,
1
),
if
~
isempty
(
NamFileInput
{
jfil
,
1
})
system
([
'ssh '
,
Parallel
(
indPC
)
.
UserName
,
'@'
,
Parallel
(
indPC
)
.
ComputerName
,
' mkdir -p '
,
Parallel
(
indPC
)
.
RemoteDirectory
,
'/'
,
PRCDir
,
'/'
,
NamFileInput
{
jfil
,
1
}])
[
NonServeL
NonServeR
]
=
system
([
'ssh '
,
Parallel
(
indPC
)
.
UserName
,
'@'
,
Parallel
(
indPC
)
.
ComputerName
,
' mkdir -p '
,
Parallel
(
indPC
)
.
RemoteDirectory
,
'/'
,
PRCDir
,
'/'
,
NamFileInput
{
jfil
,
1
}])
;
end
[
NonServeL
NonServeR
]
=
system
([
'scp '
,
NamFileInput
{
jfil
,
1
},
NamFileInput
{
jfil
,
2
},
' '
,
Parallel
(
indPC
)
.
UserName
,
'@'
,
Parallel
(
indPC
)
.
ComputerName
,
':'
,
Parallel
(
indPC
)
.
RemoteDirectory
,
'/'
,
PRCDir
,
'/'
,
NamFileInput
{
jfil
,
1
}]);
end
...
...
@@ -52,10 +52,56 @@ for indPC=1:length(Parallel),
for
jfil
=
1
:
size
(
NamFileInput
,
1
)
if
~
isempty
(
NamFileInput
{
jfil
,
1
})
if
isempty
(
dynareParallelDir
(
NamFileInput
{
jfil
,
1
},
PRCDir
,
Parallel
(
indPC
)))
if
exist
(
'OCTAVE_VERSION'
)
% Patch for peculiar behaviour of mkdir under Windows.
% It is Necessary because Octave is not able to
% create two nested directory at the same time.
% Remove (if present) the '/' chars. Can be easily transformed
% in a function.
NamFileInputTemp
=
NamFileInput
{
jfil
,
1
};
while
(
1
)
Bs
=
strfind
(
NamFileInputTemp
,
'/'
);
if
isempty
(
Bs
),
break
;
else
NamFileInputTemp
(
1
,
Bs
)
=
'\'
;
end
end
[
NonServeL
NonServeR
]
=
system
([
'mkdir \\'
,
Parallel
(
indPC
)
.
ComputerName
,
'\'
,
Parallel
(
indPC
)
.
RemoteDrive
,
'$\'
,
Parallel
(
indPC
)
.
RemoteDirectory
,
'\'
,
PRCDir
,
'\'
,
NamFileInputTemp
]);
else
mkdir
([
'\\'
,
Parallel
(
indPC
)
.
ComputerName
,
'\'
,
Parallel
(
indPC
)
.
RemoteDrive
,
'$\'
,
Parallel
(
indPC
)
.
RemoteDirectory
,
'\'
,
PRCDir
,
'\'
,
NamFileInput
{
jfil
,
1
}]);
end
end
copyfile
([
NamFileInput
{
jfil
,
1
},
NamFileInput
{
jfil
,
2
}],[
'\\'
,
Parallel
(
indPC
)
.
ComputerName
,
'\'
,
Parallel
(
indPC
)
.
RemoteDrive
,
'$\'
,
Parallel
(
indPC
)
.
RemoteDirectory
,
'\'
,
PRCDir
,
'\'
,
NamFileInput
{
jfil
,
1
}])
end
if
exist
(
'OCTAVE_VERSION'
)
% Patch for peculiar behaviour copyfile ls under Windows.
% It is Necessary because Octave is not able to
% use the jolly char '*' with copyfile.
% Remove (if present) the '/' chars. Can be easily transformed
% in a function.
NamFileInputTemp
=
NamFileInput
{
jfil
,
1
};
while
(
1
)
Bs
=
strfind
(
NamFileInputTemp
,
'/'
);
if
isempty
(
Bs
),
break
;
else
NamFileInputTemp
(
1
,
Bs
)
=
'\'
;
end
end
[
NonServeS
NonServeD
]
=
system
([
'copy '
,
NamFileInputTemp
,
NamFileInput
{
jfil
,
2
},
' \\'
,
Parallel
(
indPC
)
.
ComputerName
,
'\'
,
Parallel
(
indPC
)
.
RemoteDrive
,
'$\'
,
Parallel
(
indPC
)
.
RemoteDirectory
,
'\'
,
PRCDir
,
'\'
,
NamFileInputTemp
]);
else
copyfile
([
NamFileInput
{
jfil
,
1
},
NamFileInput
{
jfil
,
2
}],[
'\\'
,
Parallel
(
indPC
)
.
ComputerName
,
'\'
,
Parallel
(
indPC
)
.
RemoteDrive
,
'$\'
,
Parallel
(
indPC
)
.
RemoteDirectory
,
'\'
,
PRCDir
,
'\'
,
NamFileInput
{
jfil
,
1
}]);
end
end
end
end
...
...
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