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Commit 53709a32 authored by Sébastien Villemot's avatar Sébastien Villemot
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Ensure compatibility with matio 1.5

Closes: #275
parent e5dd2d31
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......@@ -130,7 +130,13 @@ sampleMHMC(LogPosteriorDensity &lpd, RandomWalkMetropolisHastings &rwmh,
MATFile *drawmat; // MCMC draws output file pointer
int matfStatus;
#else // OCTAVE_MEX_FILE e.t.c.
# if MATIO_MAJOR_VERSION > 1 || (MATIO_MAJOR_VERSION == 1 && MATIO_MINOR_VERSION >= 5)
size_t dims[2];
const matio_compression compression = MAT_COMPRESSION_NONE;
# else
int dims[2];
const int compression = COMPRESSION_NONE;
# endif
mat_t *drawmat;
matvar_t *matvar;
int matfStatus;
......@@ -304,7 +310,7 @@ sampleMHMC(LogPosteriorDensity &lpd, RandomWalkMetropolisHastings &rwmh,
}
else
{
int start[2] = {0, 0}, edge[2] = {2, 2}, stride[2] = {1, 1}, err = 0;
int start[2] = {0, 0}, edge[2], stride[2] = {1, 1}, err = 0;
mexPrintf("MHMCMC: Using interim partial draws file %s \n", mhFName.c_str());
// matvar = Mat_VarReadInfo(drawmat, "x2");
matvar = Mat_VarReadInfo(drawmat, (char *) "x2");
......@@ -317,9 +323,9 @@ sampleMHMC(LogPosteriorDensity &lpd, RandomWalkMetropolisHastings &rwmh,
else
{
// GetVariable(drawmat, "x2");
dims[0] = matvar->dims[0]-1;
dims[1] = matvar->dims[1]-1;
err = Mat_VarReadData(drawmat, matvar, mxGetPr(mxMhParamDrawsPtr), start, stride, matvar->dims);
edge[0] = matvar->dims[0];
edge[1] = matvar->dims[1];
err = Mat_VarReadData(drawmat, matvar, mxGetPr(mxMhParamDrawsPtr), start, stride, edge);
if (err)
{
fline(b) = 1;
......@@ -339,9 +345,9 @@ sampleMHMC(LogPosteriorDensity &lpd, RandomWalkMetropolisHastings &rwmh,
else
{
// GetVariable(drawmat, "x2");
dims[0] = matvar->dims[0]-1;
dims[1] = matvar->dims[1]-1;
err = Mat_VarReadData(drawmat, matvar, mxGetPr(mxMhLogPostDensPtr), start, stride, matvar->dims);
edge[0] = matvar->dims[0];
edge[1] = matvar->dims[1];
err = Mat_VarReadData(drawmat, matvar, mxGetPr(mxMhLogPostDensPtr), start, stride, edge);
if (err)
{
fline(b) = 1;
......@@ -513,7 +519,7 @@ sampleMHMC(LogPosteriorDensity &lpd, RandomWalkMetropolisHastings &rwmh,
dims[0] = currInitSizeArray;
dims[1] = npar;
matvar = Mat_VarCreate("x2", MAT_C_DOUBLE, MAT_T_DOUBLE, 2, dims, mxGetPr(mxMhParamDrawsPtr), 0);
matfStatus = Mat_VarWrite(drawmat, matvar, 0);
matfStatus = Mat_VarWrite(drawmat, matvar, compression);
Mat_VarFree(matvar);
if (matfStatus)
{
......@@ -523,7 +529,7 @@ sampleMHMC(LogPosteriorDensity &lpd, RandomWalkMetropolisHastings &rwmh,
//matfStatus = matPutVariable(drawmat, "logpo2", mxMhLogPostDensPtr);
dims[1] = 1;
matvar = Mat_VarCreate("logpo2", MAT_C_DOUBLE, MAT_T_DOUBLE, 2, dims, mxGetPr(mxMhLogPostDensPtr), 0);
matfStatus = Mat_VarWrite(drawmat, matvar, 0);
matfStatus = Mat_VarWrite(drawmat, matvar, compression);
Mat_VarFree(matvar);
if (matfStatus)
{
......
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